LabeljsMixed: Apply label information to jstable object using label data

Source: R/label.R

Apply label information to object of jstable using label data

LabeljsMixed(obj, ref)

Arguments

obj

lmer.display, coxme.display
ref

Label data made by mk.lev function

Value

lmer.display, coxme.display with label information

Details

DETAILS

Examples

library(coxme)
fit <- coxme(Surv(time, status) ~ sex + ph.ecog + ph.karno + (1 | inst) + (1 | sex), lung)
fit.table <- coxme.display(fit)
#> Warning: Using formula(x) is deprecated when x is a character vector of length > 1.
#>   Consider formula(paste(x, collapse = " ")) instead.
#> Warning: Using formula(x) is deprecated when x is a character vector of length > 1.
#>   Consider formula(paste(x, collapse = " ")) instead.
#> Warning: Using formula(x) is deprecated when x is a character vector of length > 1.
#>   Consider formula(paste(x, collapse = " ")) instead.
lung.label <- mk.lev(lung)
LabeljsMixed(fit.table, ref = lung.label)
#> $table
#>          crude HR(95%CI)    crude P value adj. HR(95%CI)     adj. P value
#> sex      "0.59 (0.42,0.82)" "0.002"       "0.56 (0.4,0.79)"  "< 0.001"   
#> ph.ecog  "1.66 (1.32,2.09)" "< 0.001"     "1.96 (1.38,2.8)"  "< 0.001"   
#> ph.karno "0.98 (0.97,1)"    "0.005"       "1.01 (0.99,1.03)" "0.241"     
#> 
#> $ranef
#>                 [,1] [,2] [,3] [,4]
#> Random effect     NA   NA   NA   NA
#> inst(Intercept) 0.02   NA   NA   NA
#> sex(Intercept)  0.00   NA   NA   NA
#> 
#> $metric
#>                     [,1] [,2] [,3] [,4]
#> <NA>                  NA   NA   NA   NA
#> No. of group(inst)    18   NA   NA   NA
#> No. of group(sex)      2   NA   NA   NA
#> No. of observations  225   NA   NA   NA
#> No. of events        162   NA   NA   NA
#> 
#> $caption
#> [1] "Mixed effects Cox model on time ('time') to event ('status') - Group inst, sex"
#>